MolNFT v1 · #502235 · protein
AlphaFold monomer V2.0 prediction for xylose isomerase (P15587)
P15587: “AlphaFold monomer V2.0 prediction for xylose isomerase (P15587)”. 4 pockets (best druggability 0.72). MolNFT v1 #502235 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P15587
- Type
- protein
- Length
- 387 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc0F878C3f3E2a1874e2A6daC80d429e553DdB0D5
- Molecule
- Xylose isomerase
- UniProt
- P15587
- Pockets
- 4 · best druggability 0.72
Structure
1 distinct chain · 49% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Xylose isomerase | protein | 387 | 49% helix, 10% strand | P15587 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 52 | 0.72 | 0.99 | 22 | empty |
| 2 | 490 | 0.65 | 0.77 | 46 | empty |
| 3 | 71 | 0.42 | 0.80 | 13 | empty |
| 4 | 66 | 0.29 | 0.73 | 10 | empty |
Compared structures
- 1MUW · The 0.86 ångström structure of xylose isomerase · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 1MUW · The 0.86 Angstrom Structure of Xylose Isomerase · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 1S5M · Xylose Isomerase in Substrate and Inhibitor Michaelis States: Atomic Resolution Studies… · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 1S5M · Xylose isomerase in substrate and inhibitor michaelis states: atomic resolution studies… · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 1S5N · Xylose isomerase in substrate and inhibitor michaelis states: atomic resolution studies… · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 1S5N · Xylose Isomerase in Substrate and Inhibitor Michaelis States: Atomic Resolution Studies… · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 1XYB · X-ray crystallographic structures of D-xylose isomerase-substrate complexes position the… · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 1XYB · X-ray crystallographic structures of D-xylose isomerase-substrate complexes position the… · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 1XYC · X-ray crystallographic structures of D-xylose isomerase-substrate complexes position the… · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 1XYC · X-ray crystallographic structures of D-xylose isomerase-substrate complexes position the… · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 1XYA · X-ray crystallographic structures of D-xylose isomerase-substrate complexes position the… · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 1XYA · X-ray crystallographic structures of D-xylose isomerase-substrate complexes position the… · an experimental structure of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P15587
- Elsewhere: UniProt P15587 · AlphaFold DB P15587
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