MolNFT v1 · #498503 · protein
AlphaFold monomer V2.0 prediction for vacuolar-sorting receptor 3 (O80977)
O80977: “AlphaFold monomer V2.0 prediction for vacuolar-sorting receptor 3 (O80977)”. 4 pockets (best druggability 0.74). MolNFT v1 #498503 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- O80977
- Type
- protein
- Length
- 628 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbDA05C32aD6eE153C8C5A78dfa48d7Ba25694fea
- Molecule
- Vacuolar-sorting receptor 3
- UniProt
- O80977
- Pockets
- 4 · best druggability 0.74
Structure
1 distinct chain · 34% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Vacuolar-sorting receptor 3 | protein | 628 | 34% helix, 21% strand | O80977 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 399 | 0.74 | 0.84 | 46 | empty |
| 2 | 54 | 0.38 | 0.80 | 11 | empty |
| 3 | 64 | 0.28 | 0.73 | 16 | empty |
| 4 | 53 | 0.25 | 0.73 | 14 | empty |
Modifications
Observed in the structure: 17 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O80977
- Elsewhere: UniProt O80977 · AlphaFold DB O80977
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