MolNFT v1 · #496694 · protein

AlphaFold monomer V2.0 prediction for vitellogenin-1 (Q90508)

Q90508: “AlphaFold monomer V2.0 prediction for vitellogenin-1 (Q90508)”. 19 pockets (best druggability 0.80). MolNFT v1 #496694 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q90508
Type: protein
Length: 1,704 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xFF408A536C6A3A5fBDCE278EcAf1143dD108348c
Molecule: Vitellogenin-1
UniProt: Q90508
Pockets: 19 · best druggability 0.80

Structure

1 distinct chain · 27% helix, 34% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Vitellogenin-1	protein	1704	27% helix, 34% strand	Q90508

Pockets

19 pockets found on a 1 Å grid, 11 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	737	0.80	0.84	87	empty
2	241	0.75	0.89	53	empty
3	425	0.71	0.82	63	empty
4	599	0.65	0.76	49	empty
5	417	0.65	0.79	36	empty

Modifications

Observed in the structure: 12 disulfide (disulfide).

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q90508
Elsewhere: UniProt Q90508 · AlphaFold DB Q90508

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