MolNFT v1 · #496481 · protein
AlphaFold monomer V2.0 prediction for VI polysaccharide biosynthesis protein VIPB/TVIC (Q04973)
Q04973: “AlphaFold monomer V2.0 prediction for VI polysaccharide biosynthesis protein VIPB/TVIC (Q04973)”. 4 pockets (best druggability 0.84). MolNFT v1 #496481 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q04973
- Type
- protein
- Length
- 348 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x21f7C119eB7500129A497A533ee353fC35d9745f
- Molecule
- VI polysaccharide biosynthesis protein VIPB/TVIC
- UniProt
- Q04973
- Pockets
- 4 · best druggability 0.84
Structure
1 distinct chain · 48% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | VI polysaccharide biosynthesis protein VIPB/TVIC | protein | 348 | 48% helix, 15% strand | Q04973 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1046 | 0.84 | 0.85 | 81 | empty |
| 2 | 121 | 0.47 | 0.78 | 19 | empty |
| 3 | 61 | 0.31 | 0.76 | 15 | empty |
| 4 | 56 | 0.27 | 0.73 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q04973
- Elsewhere: UniProt Q04973 · AlphaFold DB Q04973
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