MolNFT v1 · #495882 · protein

AlphaFold monomer V2.0 prediction for deubiquitinating protein VCPIP1 (Q8CF97)

Q8CF97: “AlphaFold monomer V2.0 prediction for deubiquitinating protein VCPIP1 (Q8CF97)”. 10 pockets (best druggability 0.77). MolNFT v1 #495882 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q8CF97
Type: protein
Length: 1,221 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x429aA010A80A47FF4a2777bB34A2bba144d19df2
Molecule: Deubiquitinating protein VCPIP1
UniProt: Q8CF97
Pockets: 10 · best druggability 0.77

Structure

1 distinct chain · 28% helix, 14% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Deubiquitinating protein VCPIP1	protein	1221	28% helix, 14% strand	Q8CF97

Pockets

10 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1192	0.77	0.79	98	empty
2	470	0.72	0.81	57	empty
3	484	0.67	0.78	51	empty
4	148	0.54	0.80	22	empty
5	271	0.51	0.75	27	empty

Compared structures

2MX2 · UBX-L domain of VCIP135 · an experimental structure of the same protein · chain A against A, TM-score 0.07
2MX2 · Ubx-L domain of VCIP135 · an experimental structure of the same protein · chain A against A, TM-score 0.07

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8CF97
Elsewhere: UniProt Q8CF97 · AlphaFold DB Q8CF97

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.