MolNFT v1 · #495091 · protein
AlphaFold monomer V2.0 prediction for V-type proton ATPase catalytic subunit a (Q40002)
Q40002: “AlphaFold monomer V2.0 prediction for V-type proton ATPase catalytic subunit a (Q40002)”. 8 pockets (best druggability 0.54). MolNFT v1 #495091 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q40002
- Type
- protein
- Length
- 580 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xdA053441BD723e362626d4A6bB084EE3e9d3C3D1
- Molecule
- V-type proton ATPase catalytic subunit a
- UniProt
- Q40002
- Pockets
- 8 · best druggability 0.54
Structure
1 distinct chain · 40% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | V-type proton ATPase catalytic subunit a | protein | 580 | 40% helix, 23% strand | Q40002 |
Pockets
8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 185 | 0.54 | 0.79 | 19 | empty |
| 2 | 126 | 0.51 | 0.80 | 28 | empty |
| 3 | 172 | 0.49 | 0.77 | 30 | empty |
| 4 | 139 | 0.41 | 0.74 | 26 | empty |
| 5 | 76 | 0.38 | 0.78 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q40002
- Elsewhere: UniProt Q40002 · AlphaFold DB Q40002
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