MolNFT v1 · #494675 · protein
AlphaFold monomer V2.0 prediction for venom allergen 5 (P0DMB9)
P0DMB9: “AlphaFold monomer V2.0 prediction for venom allergen 5 (P0DMB9)”. 2 pockets (best druggability 0.40). MolNFT v1 #494675 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P0DMB9
- Type
- protein
- Length
- 202 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5881B09f2D8e743400698633641fc1cD2Ed2BE6F
- Molecule
- Venom allergen 5
- UniProt
- P0DMB9
- Pockets
- 2 · best druggability 0.40
Structure
1 distinct chain · 30% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Venom allergen 5 | protein | 202 | 30% helix, 20% strand | P0DMB9 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 142 | 0.40 | 0.74 | 23 | empty |
| 2 | 98 | 0.38 | 0.76 | 18 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DMB9
- Elsewhere: UniProt P0DMB9 · AlphaFold DB P0DMB9
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