MolNFT v1 · #492651 · protein
AlphaFold monomer V2.0 prediction for zinc finger protein ush (Q9VPQ6)
Q9VPQ6: “AlphaFold monomer V2.0 prediction for zinc finger protein ush (Q9VPQ6)”. 1 pocket (best druggability 0.33). MolNFT v1 #492651 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9VPQ6
- Type
- protein
- Length
- 1,191 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x80D2ac0F5e3268bC5C1d28BBAA07E3169BB02b79
- Molecule
- Zinc finger protein ush
- UniProt
- Q9VPQ6
- Pockets
- 1 · best druggability 0.33
Structure
1 distinct chain · 13% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Zinc finger protein ush | protein | 1191 | 13% helix, 6% strand | Q9VPQ6 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 68 | 0.33 | 0.75 | 16 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 1FU9 · Solution structure of the ninth zinc-finger domain of the U-shaped transcription factor · an experimental structure of the same protein · chain A against A, TM-score 0.03
- 1FU9 · Solution structure of the ninth zinc-finger domain of the U-shaped transcription factor · an experimental structure of the same protein · chain A against A, TM-score 0.03
- 1FV5 · Solution structure of the first zinc finger from the drosophila U-shaped transcription… · an experimental structure of the same protein · chain A against A, TM-score 0.03
- 1FV5 · Solution structure of the first zinc finger from the drosophila U- shaped transcription… · an experimental structure of the same protein · chain A against A, TM-score 0.03
- 2L6Z · Haddock model of GATA1NF:LMO2LIM2-LDB1LID with fog · an experimental structure of the same protein · chain A against B, TM-score 0.03
- 2L6Z · haddock model of GATA1NF:Lmo2LIM2-Ldb1LID with FOG · an experimental structure of the same protein · chain A against B, TM-score 0.03
- 1Y0J · Zinc fingers as protein recognition motifs: structural basis for the GATA-1/Friend of… · an experimental structure of the same protein · chain A against B, TM-score 0.02
- 1Y0J · Zinc fingers as protein recognition motifs: structural basis for the gata-1/FRIEND of… · an experimental structure of the same protein · chain A against B, TM-score 0.02
- 1JN7 · Solution structure of a cchh mutant of the ninth cchc zinc finger of U-shaped · an experimental structure of the same protein · chain A against A, TM-score 0.02
- 1JN7 · Solution Structure of a CCHH mutant of the ninth CCHC Zinc Finger of U-shaped · an experimental structure of the same protein · chain A against A, TM-score 0.02
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9VPQ6
- Elsewhere: UniProt Q9VPQ6 · AlphaFold DB Q9VPQ6
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