MolNFT v1 · #486516 · protein
AlphaFold monomer V2.0 prediction for UBIQUINONE/MENAQUINONE biosynthesis C-methyltransferase ubie (Q3YVD2)
Q3YVD2: “AlphaFold monomer V2.0 prediction for UBIQUINONE/MENAQUINONE biosynthesis C-methyltransferase ubie (Q3YVD2)”. 3 pockets (best druggability 0.82). MolNFT v1 #486516 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q3YVD2
- Type
- protein
- Length
- 251 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x59aB60c9E40D4c6D7382E3f1301C5480406C7D85
- Molecule
- UBIQUINONE/MENAQUINONE biosynthesis C-methyltransferase ubie
- UniProt
- Q3YVD2
- Pockets
- 3 · best druggability 0.82
Structure
1 distinct chain · 49% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | UBIQUINONE/MENAQUINONE biosynthesis C-methyltransferase ubie | protein | 251 | 49% helix, 23% strand | Q3YVD2 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 342 | 0.82 | 0.91 | 59 | empty |
| 2 | 60 | 0.38 | 0.80 | 20 | empty |
| 3 | 84 | 0.35 | 0.76 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3YVD2
- Elsewhere: UniProt Q3YVD2 · AlphaFold DB Q3YVD2
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