MolNFT v1 · #483836 · protein
AlphaFold monomer V2.0 prediction for tyrosyl-DNA phosphodiesterase 1 (Q8BJ37)
Q8BJ37: “AlphaFold monomer V2.0 prediction for tyrosyl-DNA phosphodiesterase 1 (Q8BJ37)”. 9 pockets (best druggability 0.78). MolNFT v1 #483836 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8BJ37
- Type
- protein
- Length
- 609 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x75249d30F7d9193e8C1F209cF0E17e3Cef40D642
- Molecule
- Tyrosyl-DNA phosphodiesterase 1
- UniProt
- Q8BJ37
- Pockets
- 9 · best druggability 0.78
Structure
1 distinct chain · 24% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Tyrosyl-DNA phosphodiesterase 1 | protein | 609 | 24% helix, 19% strand | Q8BJ37 |
Pockets
9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 586 | 0.78 | 0.84 | 74 | empty |
| 2 | 124 | 0.56 | 0.83 | 24 | empty |
| 3 | 100 | 0.54 | 0.84 | 19 | empty |
| 4 | 227 | 0.49 | 0.75 | 34 | empty |
| 5 | 95 | 0.46 | 0.80 | 28 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8BJ37
- Elsewhere: UniProt Q8BJ37 · AlphaFold DB Q8BJ37
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