MolNFT v1 · #479612 · protein
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase D (B5QW16)
B5QW16: “AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase D (B5QW16)”. 2 pockets (best druggability 0.68). MolNFT v1 #479612 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B5QW16
- Type
- protein
- Length
- 349 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5DD335da0E7B6349A9761Bec7652a919dC6599C6
- Molecule
- TRNA pseudouridine synthase D
- UniProt
- B5QW16
- Pockets
- 2 · best druggability 0.68
Structure
1 distinct chain · 33% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase D | protein | 349 | 33% helix, 26% strand | B5QW16 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 630 | 0.68 | 0.77 | 55 | empty |
| 2 | 109 | 0.45 | 0.78 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5QW16
- Elsewhere: UniProt B5QW16 · AlphaFold DB B5QW16
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