MolNFT v1 · #479600 · protein
AlphaFold monomer V2.0 prediction for probable tRNA pseudouridine synthase D (Q9V107)
Q9V107: “AlphaFold monomer V2.0 prediction for probable tRNA pseudouridine synthase D (Q9V107)”. 3 pockets (best druggability 0.73). MolNFT v1 #479600 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9V107
- Type
- protein
- Length
- 406 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x80D2ac0F5e3268bC5C1d28BBAA07E3169BB02b79
- Molecule
- Probable tRNA pseudouridine synthase D
- UniProt
- Q9V107
- Pockets
- 3 · best druggability 0.73
Structure
1 distinct chain · 39% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable tRNA pseudouridine synthase D | protein | 406 | 39% helix, 24% strand | Q9V107 |
Pockets
3 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 994 | 0.73 | 0.76 | 60 | empty |
| 2 | 172 | 0.51 | 0.78 | 28 | empty |
| 3 | 169 | 0.50 | 0.77 | 24 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9V107
- Elsewhere: UniProt Q9V107 · AlphaFold DB Q9V107
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