MolNFT v1 · #479553 · protein
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase D (Q5ZV19)
Q5ZV19: “AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase D (Q5ZV19)”. 3 pockets (best druggability 0.71). MolNFT v1 #479553 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5ZV19
- Type
- protein
- Length
- 338 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7c75F0f7d6d136A2b8D4C6C6e9b3D8a697949DF1
- Molecule
- TRNA pseudouridine synthase D
- UniProt
- Q5ZV19
- Pockets
- 3 · best druggability 0.71
Structure
1 distinct chain · 33% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase D | protein | 338 | 33% helix, 27% strand | Q5ZV19 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 768 | 0.71 | 0.77 | 68 | empty |
| 2 | 61 | 0.38 | 0.79 | 14 | empty |
| 3 | 51 | 0.35 | 0.79 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5ZV19
- Elsewhere: UniProt Q5ZV19 · AlphaFold DB Q5ZV19
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