MolNFT v1 · #479545 · protein
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase D (P55985)
P55985: “AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase D (P55985)”. 3 pockets (best druggability 0.69). MolNFT v1 #479545 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P55985
- Type
- protein
- Length
- 381 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa73BAb1DabE4333A884D03393eAa10c3B4215494
- Molecule
- TRNA pseudouridine synthase D
- UniProt
- P55985
- Pockets
- 3 · best druggability 0.69
Structure
1 distinct chain · 38% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase D | protein | 381 | 38% helix, 23% strand | P55985 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 134 | 0.69 | 0.90 | 30 | empty |
| 2 | 580 | 0.68 | 0.77 | 58 | empty |
| 3 | 51 | 0.26 | 0.74 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P55985
- Elsewhere: UniProt P55985 · AlphaFold DB P55985
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