MolNFT v1 · #479525 · protein
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase D (B2VFZ5)
B2VFZ5: “AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase D (B2VFZ5)”. 2 pockets (best druggability 0.78). MolNFT v1 #479525 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B2VFZ5
- Type
- protein
- Length
- 349 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9073C46348542FfE4327c3F363F9B51B22058e75
- Molecule
- TRNA pseudouridine synthase D
- UniProt
- B2VFZ5
- Pockets
- 2 · best druggability 0.78
Structure
1 distinct chain · 34% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase D | protein | 349 | 34% helix, 27% strand | B2VFZ5 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 987 | 0.78 | 0.80 | 84 | empty |
| 2 | 63 | 0.28 | 0.73 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B2VFZ5
- Elsewhere: UniProt B2VFZ5 · AlphaFold DB B2VFZ5
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