MolNFT v1 · #479473 · protein
AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase C (Q8DBG5)
Q8DBG5: “AlphaFold monomer V2.0 prediction for tRNA pseudouridine synthase C (Q8DBG5)”. 4 pockets (best druggability 0.63). MolNFT v1 #479473 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8DBG5
- Type
- protein
- Length
- 245 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9F605311B7e26e76340423EfAfbE5e2EFc7A0b7C
- Molecule
- TRNA pseudouridine synthase C
- UniProt
- Q8DBG5
- Pockets
- 4 · best druggability 0.63
Structure
1 distinct chain · 21% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA pseudouridine synthase C | protein | 245 | 21% helix, 30% strand | Q8DBG5 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 222 | 0.63 | 0.82 | 28 | empty |
| 2 | 114 | 0.40 | 0.76 | 20 | empty |
| 3 | 82 | 0.40 | 0.78 | 24 | empty |
| 4 | 53 | 0.29 | 0.76 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8DBG5
- Elsewhere: UniProt Q8DBG5 · AlphaFold DB Q8DBG5
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