MolNFT v1 · #479285 · protein

AlphaFold monomer V2.0 prediction for probable tRNA pseudouridine synthase B (Q9V1A5)

Q9V1A5: “AlphaFold monomer V2.0 prediction for probable tRNA pseudouridine synthase B (Q9V1A5)”. 3 pockets (best druggability 0.59). MolNFT v1 #479285 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q9V1A5
Type: protein
Length: 334 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xd10960F956646DE8b64d3598984c91C2d5Af3D7b
Molecule: Probable tRNA pseudouridine synthase B
UniProt: Q9V1A5
Pockets: 3 · best druggability 0.59

Structure

1 distinct chain · 30% helix, 32% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Probable tRNA pseudouridine synthase B	protein	334	30% helix, 32% strand	Q9V1A5

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	245	0.59	0.79	32	empty
2	95	0.36	0.74	17	empty
3	67	0.29	0.74	17	empty

Compared structures

2AUS · Crystal structure of the archaeal box H/ACA sRNP Nop10-Cbf5 complex · an experimental structure of the same protein · chain A against C, TM-score 0.91
2AUS · Crystal structure of the archaeal box H/ACA srnp NOP10-CBF5 complex · an experimental structure of the same protein · chain A against C, TM-score 0.91

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9V1A5
Elsewhere: UniProt Q9V1A5 · AlphaFold DB Q9V1A5

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