MolNFT v1 · #473177 · protein
AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase TRIM35 (Q8C006)
Q8C006: “AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase TRIM35 (Q8C006)”. 3 pockets (best druggability 0.45). MolNFT v1 #473177 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8C006
- Type
- protein
- Length
- 501 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbff27Dc0a932A6E0d9Fe883AAbD1BF27bB95A69F
- Molecule
- E3 ubiquitin-protein ligase TRIM35
- UniProt
- Q8C006
- Pockets
- 3 · best druggability 0.45
Structure
1 distinct chain · 38% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | E3 ubiquitin-protein ligase TRIM35 | protein | 501 | 38% helix, 18% strand | Q8C006 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 145 | 0.45 | 0.76 | 25 | empty |
| 2 | 124 | 0.45 | 0.78 | 22 | empty |
| 3 | 122 | 0.39 | 0.74 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8C006
- Elsewhere: UniProt Q8C006 · AlphaFold DB Q8C006
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