MolNFT v1 · #472494 · protein
AlphaFold monomer V2.0 prediction for periplasmic trehalase (Q0T5J8)
Q0T5J8: “AlphaFold monomer V2.0 prediction for periplasmic trehalase (Q0T5J8)”. 4 pockets (best druggability 0.75). MolNFT v1 #472494 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q0T5J8
- Type
- protein
- Length
- 565 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA32Fdfbad4dfbdC07f57d6Aa6C5862EDA88D0Ec3
- Molecule
- Periplasmic trehalase
- UniProt
- Q0T5J8
- Pockets
- 4 · best druggability 0.75
Structure
1 distinct chain · 46% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Periplasmic trehalase | protein | 565 | 46% helix, 8% strand | Q0T5J8 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 73 | 0.75 | 0.98 | 24 | empty |
| 2 | 326 | 0.56 | 0.76 | 38 | empty |
| 3 | 89 | 0.37 | 0.76 | 17 | empty |
| 4 | 69 | 0.30 | 0.74 | 16 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0T5J8
- Elsewhere: UniProt Q0T5J8 · AlphaFold DB Q0T5J8
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