MolNFT v1 · #472438 · protein

AlphaFold monomer V2.0 prediction for trehalase (Q9SU50)

Q9SU50: “AlphaFold monomer V2.0 prediction for trehalase (Q9SU50)”. 5 pockets (best druggability 0.75). MolNFT v1 #472438 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q9SU50
Type: protein
Length: 626 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x7FDF8b382C6a36A8772D1A265E8e480c7DF0A9C1
Molecule: Trehalase
UniProt: Q9SU50
Pockets: 5 · best druggability 0.75

Structure

1 distinct chain · 46% helix, 9% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Trehalase	protein	626	46% helix, 9% strand	Q9SU50

Pockets

5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	76	0.75	0.98	24	empty
2	383	0.60	0.76	40	empty
3	192	0.52	0.78	27	empty
4	76	0.30	0.73	16	empty
5	52	0.24	0.72	18	empty

Compared structures

7EAW · Trehalase of arabidopsis thaliana acid mutant -D380A trehalose complex · an experimental structure of the same protein · chain A against B, TM-score 0.88
7E9X · Trehalase of arabidopsis thaliana acid mutant -D380A · an experimental structure of the same protein · chain A against B, TM-score 0.88
7E9U · Trehalase of Arabidopsis thaliana · an experimental structure of the same protein · chain A against A, TM-score 0.86
7E9U · Trehalase of arabidopsis thaliana · an experimental structure of the same protein · chain A against A, TM-score 0.86

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9SU50
Elsewhere: UniProt Q9SU50 · AlphaFold DB Q9SU50

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