MolNFT v1 · #471563 · protein
AlphaFold monomer V2.0 prediction for thylakoidal processing peptidase 1, chloroplastic (O04348)
O04348: “AlphaFold monomer V2.0 prediction for thylakoidal processing peptidase 1, chloroplastic (O04348)”. 3 pockets (best druggability 0.46). MolNFT v1 #471563 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- O04348
- Type
- protein
- Length
- 340 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9248A6a2Adb75e0b630150924b6a8d168C063c9a
- Molecule
- Thylakoidal processing peptidase 1, chloroplastic
- UniProt
- O04348
- Pockets
- 3 · best druggability 0.46
Structure
1 distinct chain · 20% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Thylakoidal processing peptidase 1, chloroplastic | protein | 340 | 20% helix, 17% strand | O04348 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 140 | 0.46 | 0.77 | 21 | empty |
| 2 | 57 | 0.39 | 0.80 | 16 | empty |
| 3 | 56 | 0.27 | 0.73 | 9 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O04348
- Elsewhere: UniProt O04348 · AlphaFold DB O04348
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