MolNFT v1 · #466600 · protein
AlphaFold monomer V2.0 prediction for TRNA(ILE)-lysidine synthase (C3PM75)
C3PM75: “AlphaFold monomer V2.0 prediction for TRNA(ILE)-lysidine synthase (C3PM75)”. 5 pockets (best druggability 0.79). MolNFT v1 #466600 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- C3PM75
- Type
- protein
- Length
- 478 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbff27Dc0a932A6E0d9Fe883AAbD1BF27bB95A69F
- Molecule
- TRNA(ILE)-lysidine synthase
- UniProt
- C3PM75
- Pockets
- 5 · best druggability 0.79
Structure
1 distinct chain · 41% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA(ILE)-lysidine synthase | protein | 478 | 41% helix, 19% strand | C3PM75 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 605 | 0.79 | 0.85 | 52 | empty |
| 2 | 447 | 0.76 | 0.85 | 41 | empty |
| 3 | 142 | 0.50 | 0.79 | 24 | empty |
| 4 | 255 | 0.47 | 0.73 | 29 | empty |
| 5 | 52 | 0.43 | 0.83 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C3PM75
- Elsewhere: UniProt C3PM75 · AlphaFold DB C3PM75
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