MolNFT v1 · #465208 · protein
AlphaFold monomer V2.0 prediction for thermosome subunit beta (P48425)
P48425: “AlphaFold monomer V2.0 prediction for thermosome subunit beta (P48425)”. 2 pockets (best druggability 0.82). MolNFT v1 #465208 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P48425
- Type
- protein
- Length
- 543 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9188600a0FCa2914254C94299b1bd9721Bc4D500
- Molecule
- Thermosome subunit beta
- UniProt
- P48425
- Pockets
- 2 · best druggability 0.82
Structure
1 distinct chain · 50% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Thermosome subunit beta | protein | 543 | 50% helix, 19% strand | P48425 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 336 | 0.82 | 0.92 | 52 | empty |
| 2 | 142 | 0.40 | 0.74 | 29 | empty |
Compared structures
- 1A6E · Thermosome-mg-ADP-ALF3 complex · an experimental structure of the same protein · chain A against B, TM-score 0.90
- 1A6E · Thermosome-mg-ADP-ALF3 complex · an experimental structure of the same protein · chain A against B, TM-score 0.90
- 1A6D · Thermosome from T. acidophilum · an experimental structure of the same protein · chain A against B, TM-score 0.89
- 1A6D · Thermosome from T. acidophilum · an experimental structure of the same protein · chain A against B, TM-score 0.89
- 1E0R · Beta-apical domain of thermosome · an experimental structure of the same protein · chain A against B, TM-score 0.27
- 1E0R · Beta-apical domain of thermosome · an experimental structure of the same protein · chain A against B, TM-score 0.27
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P48425
- Elsewhere: UniProt P48425 · AlphaFold DB P48425
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