MolNFT v1 · #463269 · protein
AlphaFold monomer V2.0 prediction for phosphomethylpyrimidine synthase (B0K5Z9)
B0K5Z9: “AlphaFold monomer V2.0 prediction for phosphomethylpyrimidine synthase (B0K5Z9)”. 4 pockets (best druggability 0.71). MolNFT v1 #463269 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B0K5Z9
- Type
- protein
- Length
- 432 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xacC927A147a8510a9171e5fD0F68b8F54851494d
- Molecule
- Phosphomethylpyrimidine synthase
- UniProt
- B0K5Z9
- Pockets
- 4 · best druggability 0.71
Structure
1 distinct chain · 53% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphomethylpyrimidine synthase | protein | 432 | 53% helix, 9% strand | B0K5Z9 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 349 | 0.71 | 0.84 | 43 | empty |
| 2 | 192 | 0.48 | 0.76 | 23 | empty |
| 3 | 79 | 0.32 | 0.74 | 22 | empty |
| 4 | 79 | 0.32 | 0.73 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0K5Z9
- Elsewhere: UniProt B0K5Z9 · AlphaFold DB B0K5Z9
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