MolNFT v1 · #463007 · protein
AlphaFold monomer V2.0 prediction for phosphomethylpyrimidine synthase (Q8NQW7)
Q8NQW7: “AlphaFold monomer V2.0 prediction for phosphomethylpyrimidine synthase (Q8NQW7)”. 7 pockets (best druggability 0.76). MolNFT v1 #463007 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8NQW7
- Type
- protein
- Length
- 587 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xDc9c9Af88E0b0A5Ec61DD36Ae0Ecd840271f80cF
- Molecule
- Phosphomethylpyrimidine synthase
- UniProt
- Q8NQW7
- Pockets
- 7 · best druggability 0.76
Structure
1 distinct chain · 45% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphomethylpyrimidine synthase | protein | 587 | 45% helix, 11% strand | Q8NQW7 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 251 | 0.76 | 0.89 | 38 | empty |
| 2 | 411 | 0.72 | 0.83 | 46 | empty |
| 3 | 160 | 0.56 | 0.81 | 25 | empty |
| 4 | 105 | 0.46 | 0.80 | 19 | empty |
| 5 | 123 | 0.38 | 0.74 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8NQW7
- Elsewhere: UniProt Q8NQW7 · AlphaFold DB Q8NQW7
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