MolNFT v1 · #463005 · protein
AlphaFold monomer V2.0 prediction for phosphomethylpyrimidine synthase (Q8FPT3)
Q8FPT3: “AlphaFold monomer V2.0 prediction for phosphomethylpyrimidine synthase (Q8FPT3)”. 6 pockets (best druggability 0.76). MolNFT v1 #463005 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8FPT3
- Type
- protein
- Length
- 580 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb87B1c18Cd8460968d29Db6614aA1B581FaDe5F6
- Molecule
- Phosphomethylpyrimidine synthase
- UniProt
- Q8FPT3
- Pockets
- 6 · best druggability 0.76
Structure
1 distinct chain · 45% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphomethylpyrimidine synthase | protein | 580 | 45% helix, 11% strand | Q8FPT3 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 272 | 0.76 | 0.89 | 42 | empty |
| 2 | 388 | 0.73 | 0.84 | 48 | empty |
| 3 | 135 | 0.54 | 0.82 | 24 | empty |
| 4 | 85 | 0.40 | 0.78 | 14 | empty |
| 5 | 82 | 0.39 | 0.77 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8FPT3
- Elsewhere: UniProt Q8FPT3 · AlphaFold DB Q8FPT3
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