MolNFT v1 · #457887 · protein
AlphaFold monomer V2.0 prediction for antigen peptide transporter 1 (Q28433)
Q28433: “AlphaFold monomer V2.0 prediction for antigen peptide transporter 1 (Q28433)”. 9 pockets (best druggability 0.78). MolNFT v1 #457887 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q28433
- Type
- protein
- Length
- 748 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0EA189b2343A464f560b44103f6A3396Da1dA8a9
- Molecule
- Antigen peptide transporter 1
- UniProt
- Q28433
- Pockets
- 9 · best druggability 0.78
Structure
1 distinct chain · 68% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Antigen peptide transporter 1 | protein | 748 | 68% helix, 8% strand | Q28433 |
Pockets
9 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 914 | 0.78 | 0.80 | 71 | empty |
| 2 | 78 | 0.72 | 0.95 | 17 | empty |
| 3 | 514 | 0.63 | 0.76 | 49 | empty |
| 4 | 296 | 0.63 | 0.80 | 39 | empty |
| 5 | 176 | 0.59 | 0.81 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q28433
- Elsewhere: UniProt Q28433 · AlphaFold DB Q28433
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