MolNFT v1 · #456106 · protein

AlphaFold monomer V2.0 prediction for putative type-1 restriction enzyme specificity protein MG438 (Q49434)

Q49434: “AlphaFold monomer V2.0 prediction for putative type-1 restriction enzyme specificity protein MG438 (Q49434)”. 4 pockets (best druggability 0.54). MolNFT v1 #456106 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q49434
Type: protein
Length: 383 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xbb2F1C7CB3A1eeFAc24fCa72cc627162D5413FD7
Molecule: Putative type-1 restriction enzyme specificity protein MG438
UniProt: Q49434
Pockets: 4 · best druggability 0.54

Structure

1 distinct chain · 38% helix, 22% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative type-1 restriction enzyme specificity protein MG438	protein	383	38% helix, 22% strand	Q49434

Pockets

4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	337	0.54	0.74	39	empty
2	254	0.54	0.77	32	empty
3	96	0.45	0.80	19	empty
4	112	0.41	0.76	21	empty

Compared structures

1YDX · Crystal structure of Type-I restriction-modification system S subunit from M. genitalium · an experimental structure of the same protein · chain A against A, TM-score 0.94
1YDX · Crystal structure of type-I restriction-modification system S subunit from M. genitalium · an experimental structure of the same protein · chain A against A, TM-score 0.94

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q49434
Elsewhere: UniProt Q49434 · AlphaFold DB Q49434

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