MolNFT v1 · #455365 · protein
AlphaFold monomer V2.0 prediction for tyrosine--tRNA ligase, cytoplasmic (Q5ZJ08)
Q5ZJ08: “AlphaFold monomer V2.0 prediction for tyrosine--tRNA ligase, cytoplasmic (Q5ZJ08)”. 6 pockets (best druggability 0.77). MolNFT v1 #455365 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5ZJ08
- Type
- protein
- Length
- 527 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xC0f5cbbADD874269E5C27dE8258432D46a904ac7
- Molecule
- Tyrosine--tRNA ligase, cytoplasmic
- UniProt
- Q5ZJ08
- Pockets
- 6 · best druggability 0.77
Structure
1 distinct chain · 38% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Tyrosine--tRNA ligase, cytoplasmic | protein | 527 | 38% helix, 20% strand | Q5ZJ08 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 600 | 0.77 | 0.83 | 47 | empty |
| 2 | 187 | 0.50 | 0.77 | 28 | empty |
| 3 | 59 | 0.49 | 0.86 | 16 | empty |
| 4 | 124 | 0.48 | 0.78 | 14 | empty |
| 5 | 59 | 0.43 | 0.82 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5ZJ08
- Elsewhere: UniProt Q5ZJ08 · AlphaFold DB Q5ZJ08
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