MolNFT v1 · #455054 · protein
AlphaFold monomer V2.0 prediction for valine--tRNA ligase (Q5LP30)
Q5LP30: “AlphaFold monomer V2.0 prediction for valine--tRNA ligase (Q5LP30)”. 8 pockets (best druggability 0.77). MolNFT v1 #455054 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5LP30
- Type
- protein
- Length
- 1,020 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbB9927F4f7DAfE03D0B102EF0E3c7eA9c95b66ca
- Molecule
- Valine--tRNA ligase
- UniProt
- Q5LP30
- Pockets
- 8 · best druggability 0.77
Structure
1 distinct chain · 46% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Valine--tRNA ligase | protein | 1020 | 46% helix, 19% strand | Q5LP30 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 769 | 0.77 | 0.81 | 59 | empty |
| 2 | 593 | 0.67 | 0.77 | 61 | empty |
| 3 | 378 | 0.66 | 0.80 | 40 | empty |
| 4 | 211 | 0.65 | 0.84 | 25 | empty |
| 5 | 51 | 0.36 | 0.80 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5LP30
- Elsewhere: UniProt Q5LP30 · AlphaFold DB Q5LP30
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