MolNFT v1 · #454984 · protein
AlphaFold monomer V2.0 prediction for valine--tRNA ligase (P75304)
P75304: “AlphaFold monomer V2.0 prediction for valine--tRNA ligase (P75304)”. 10 pockets (best druggability 0.75). MolNFT v1 #454984 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P75304
- Type
- protein
- Length
- 838 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9B130d619fCFc21d0D08E5Ce38Cf42A5fbe230CB
- Molecule
- Valine--tRNA ligase
- UniProt
- P75304
- Pockets
- 10 · best druggability 0.75
Structure
1 distinct chain · 48% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Valine--tRNA ligase | protein | 838 | 48% helix, 19% strand | P75304 |
Pockets
10 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 819 | 0.75 | 0.79 | 49 | empty |
| 2 | 489 | 0.66 | 0.78 | 48 | empty |
| 3 | 255 | 0.61 | 0.80 | 29 | empty |
| 4 | 72 | 0.48 | 0.84 | 17 | empty |
| 5 | 50 | 0.43 | 0.84 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P75304
- Elsewhere: UniProt P75304 · AlphaFold DB P75304
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