MolNFT v1 · #454916 · protein
AlphaFold monomer V2.0 prediction for valine--tRNA ligase (Q3YT16)
Q3YT16: “AlphaFold monomer V2.0 prediction for valine--tRNA ligase (Q3YT16)”. 7 pockets (best druggability 0.75). MolNFT v1 #454916 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q3YT16
- Type
- protein
- Length
- 802 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3B7D20F680D3B25d23fCE63dAf63b8309002A8C0
- Molecule
- Valine--tRNA ligase
- UniProt
- Q3YT16
- Pockets
- 7 · best druggability 0.75
Structure
1 distinct chain · 45% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Valine--tRNA ligase | protein | 802 | 45% helix, 19% strand | Q3YT16 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 742 | 0.75 | 0.80 | 57 | empty |
| 2 | 468 | 0.70 | 0.80 | 49 | empty |
| 3 | 59 | 0.62 | 0.92 | 18 | empty |
| 4 | 94 | 0.36 | 0.75 | 18 | empty |
| 5 | 81 | 0.33 | 0.74 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3YT16
- Elsewhere: UniProt Q3YT16 · AlphaFold DB Q3YT16
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