MolNFT v1 · #454051 · protein
AlphaFold monomer V2.0 prediction for synaptotagmin-5 (Q8L706)
Q8L706: “AlphaFold monomer V2.0 prediction for synaptotagmin-5 (Q8L706)”. 7 pockets (best druggability 0.81). MolNFT v1 #454051 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8L706
- Type
- protein
- Length
- 560 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7c75F0f7d6d136A2b8D4C6C6e9b3D8a697949DF1
- Molecule
- Synaptotagmin-5
- UniProt
- Q8L706
- Pockets
- 7 · best druggability 0.81
Structure
1 distinct chain · 22% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Synaptotagmin-5 | protein | 560 | 22% helix, 38% strand | Q8L706 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 620 | 0.81 | 0.84 | 47 | empty |
| 2 | 370 | 0.58 | 0.75 | 29 | empty |
| 3 | 187 | 0.44 | 0.74 | 21 | empty |
| 4 | 76 | 0.40 | 0.79 | 17 | empty |
| 5 | 121 | 0.38 | 0.74 | 26 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8L706
- Elsewhere: UniProt Q8L706 · AlphaFold DB Q8L706
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