MolNFT v1 · #453805 · protein
AlphaFold monomer V2.0 prediction for serine--tRNA ligase (Q5PGI6)
Q5PGI6: “AlphaFold monomer V2.0 prediction for serine--tRNA ligase (Q5PGI6)”. 4 pockets (best druggability 0.73). MolNFT v1 #453805 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5PGI6
- Type
- protein
- Length
- 430 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x032de8ecd31921A4EaFf7f09A852178F9c639617
- Molecule
- Serine--tRNA ligase
- UniProt
- Q5PGI6
- Pockets
- 4 · best druggability 0.73
Structure
1 distinct chain · 45% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Serine--tRNA ligase | protein | 430 | 45% helix, 20% strand | Q5PGI6 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 620 | 0.73 | 0.81 | 57 | empty |
| 2 | 97 | 0.48 | 0.81 | 27 | empty |
| 3 | 77 | 0.41 | 0.79 | 17 | empty |
| 4 | 89 | 0.38 | 0.76 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5PGI6
- Elsewhere: UniProt Q5PGI6 · AlphaFold DB Q5PGI6
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