MolNFT v1 · #453590 · protein
AlphaFold monomer V2.0 prediction for serine--tRNA ligase (A5VHP5)
A5VHP5: “AlphaFold monomer V2.0 prediction for serine--tRNA ligase (A5VHP5)”. 4 pockets (best druggability 0.71). MolNFT v1 #453590 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- A5VHP5
- Type
- protein
- Length
- 435 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x79a905d858Ce72991FD6E7a9C6498620f42E146D
- Molecule
- Serine--tRNA ligase
- UniProt
- A5VHP5
- Pockets
- 4 · best druggability 0.71
Structure
1 distinct chain · 45% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Serine--tRNA ligase | protein | 435 | 45% helix, 20% strand | A5VHP5 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 609 | 0.71 | 0.79 | 53 | empty |
| 2 | 102 | 0.42 | 0.77 | 20 | empty |
| 3 | 65 | 0.41 | 0.80 | 14 | empty |
| 4 | 76 | 0.31 | 0.74 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5VHP5
- Elsewhere: UniProt A5VHP5 · AlphaFold DB A5VHP5
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