MolNFT v1 · #452551 · protein
AlphaFold monomer V2.0 prediction for arginine--tRNA ligase (B8D7E4)
B8D7E4: “AlphaFold monomer V2.0 prediction for arginine--tRNA ligase (B8D7E4)”. 5 pockets (best druggability 0.67). MolNFT v1 #452551 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B8D7E4
- Type
- protein
- Length
- 574 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA528629DC5BcCeBDa9059C9f45aab2F210565E6f
- Molecule
- Arginine--tRNA ligase
- UniProt
- B8D7E4
- Pockets
- 5 · best druggability 0.67
Structure
1 distinct chain · 56% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Arginine--tRNA ligase | protein | 574 | 56% helix, 13% strand | B8D7E4 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 383 | 0.67 | 0.80 | 35 | empty |
| 2 | 171 | 0.47 | 0.76 | 30 | empty |
| 3 | 145 | 0.44 | 0.75 | 19 | empty |
| 4 | 91 | 0.35 | 0.74 | 20 | empty |
| 5 | 56 | 0.30 | 0.74 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8D7E4
- Elsewhere: UniProt B8D7E4 · AlphaFold DB B8D7E4
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