MolNFT v1 · #452550 · protein
AlphaFold monomer V2.0 prediction for arginine--tRNA ligase (Q08888)
Q08888: “AlphaFold monomer V2.0 prediction for arginine--tRNA ligase (Q08888)”. 4 pockets (best druggability 0.67). MolNFT v1 #452550 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q08888
- Type
- protein
- Length
- 580 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xFCd07EE2Dc6A020627FBe36C379d324e4f874651
- Molecule
- Arginine--tRNA ligase
- UniProt
- Q08888
- Pockets
- 4 · best druggability 0.67
Structure
1 distinct chain · 56% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Arginine--tRNA ligase | protein | 580 | 56% helix, 13% strand | Q08888 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 393 | 0.67 | 0.80 | 37 | empty |
| 2 | 216 | 0.53 | 0.77 | 30 | empty |
| 3 | 121 | 0.45 | 0.78 | 20 | empty |
| 4 | 63 | 0.29 | 0.73 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q08888
- Elsewhere: UniProt Q08888 · AlphaFold DB Q08888
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