MolNFT v1 · #452212 · protein
AlphaFold monomer V2.0 prediction for proline--tRNA ligase (B5YKW0)
B5YKW0: “AlphaFold monomer V2.0 prediction for proline--tRNA ligase (B5YKW0)”. 5 pockets (best druggability 0.72). MolNFT v1 #452212 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B5YKW0
- Type
- protein
- Length
- 571 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x79a905d858Ce72991FD6E7a9C6498620f42E146D
- Molecule
- Proline--tRNA ligase
- UniProt
- B5YKW0
- Pockets
- 5 · best druggability 0.72
Structure
1 distinct chain · 28% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Proline--tRNA ligase | protein | 571 | 28% helix, 31% strand | B5YKW0 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 496 | 0.72 | 0.81 | 49 | empty |
| 2 | 100 | 0.47 | 0.80 | 20 | empty |
| 3 | 76 | 0.38 | 0.78 | 13 | empty |
| 4 | 55 | 0.27 | 0.74 | 17 | empty |
| 5 | 50 | 0.26 | 0.74 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5YKW0
- Elsewhere: UniProt B5YKW0 · AlphaFold DB B5YKW0
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