MolNFT v1 · #451952 · protein
AlphaFold monomer V2.0 prediction for proline--tRNA ligase (C6DDF6)
C6DDF6: “AlphaFold monomer V2.0 prediction for proline--tRNA ligase (C6DDF6)”. 4 pockets (best druggability 0.72). MolNFT v1 #451952 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- C6DDF6
- Type
- protein
- Length
- 572 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7012c0b45c68a2c067644b9d3e5DDa06892c6957
- Molecule
- Proline--tRNA ligase
- UniProt
- C6DDF6
- Pockets
- 4 · best druggability 0.72
Structure
1 distinct chain · 30% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Proline--tRNA ligase | protein | 572 | 30% helix, 29% strand | C6DDF6 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 484 | 0.72 | 0.81 | 49 | empty |
| 2 | 92 | 0.45 | 0.80 | 21 | empty |
| 3 | 78 | 0.32 | 0.74 | 19 | empty |
| 4 | 54 | 0.31 | 0.76 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C6DDF6
- Elsewhere: UniProt C6DDF6 · AlphaFold DB C6DDF6
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