MolNFT v1 · #451824 · protein
AlphaFold monomer V2.0 prediction for proline--tRNA ligase (B0SDM9)
B0SDM9: “AlphaFold monomer V2.0 prediction for proline--tRNA ligase (B0SDM9)”. 5 pockets (best druggability 0.74). MolNFT v1 #451824 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B0SDM9
- Type
- protein
- Length
- 586 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x80D2ac0F5e3268bC5C1d28BBAA07E3169BB02b79
- Molecule
- Proline--tRNA ligase
- UniProt
- B0SDM9
- Pockets
- 5 · best druggability 0.74
Structure
1 distinct chain · 32% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Proline--tRNA ligase | protein | 586 | 32% helix, 29% strand | B0SDM9 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 635 | 0.74 | 0.81 | 63 | empty |
| 2 | 146 | 0.48 | 0.77 | 24 | empty |
| 3 | 138 | 0.46 | 0.77 | 26 | empty |
| 4 | 99 | 0.43 | 0.79 | 19 | empty |
| 5 | 94 | 0.37 | 0.76 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0SDM9
- Elsewhere: UniProt B0SDM9 · AlphaFold DB B0SDM9
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