MolNFT v1 · #451543 · protein
AlphaFold monomer V2.0 prediction for proline--tRNA ligase (B8DTM3)
B8DTM3: “AlphaFold monomer V2.0 prediction for proline--tRNA ligase (B8DTM3)”. 6 pockets (best druggability 0.75). MolNFT v1 #451543 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B8DTM3
- Type
- protein
- Length
- 599 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb543D221A8F2C8E8933aA039D7bC2Ed33e0DB216
- Molecule
- Proline--tRNA ligase
- UniProt
- B8DTM3
- Pockets
- 6 · best druggability 0.75
Structure
1 distinct chain · 29% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Proline--tRNA ligase | protein | 599 | 29% helix, 30% strand | B8DTM3 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 759 | 0.75 | 0.80 | 60 | empty |
| 2 | 210 | 0.54 | 0.78 | 23 | empty |
| 3 | 80 | 0.30 | 0.73 | 25 | empty |
| 4 | 53 | 0.29 | 0.75 | 10 | empty |
| 5 | 51 | 0.27 | 0.74 | 10 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8DTM3
- Elsewhere: UniProt B8DTM3 · AlphaFold DB B8DTM3
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