MolNFT v1 · #449468 · protein
AlphaFold monomer V2.0 prediction for lysine--tRNA ligase (Q5QYV9)
Q5QYV9: “AlphaFold monomer V2.0 prediction for lysine--tRNA ligase (Q5QYV9)”. 4 pockets (best druggability 0.75). MolNFT v1 #449468 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5QYV9
- Type
- protein
- Length
- 503 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9188600a0FCa2914254C94299b1bd9721Bc4D500
- Molecule
- Lysine--tRNA ligase
- UniProt
- Q5QYV9
- Pockets
- 4 · best druggability 0.75
Structure
1 distinct chain · 36% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lysine--tRNA ligase | protein | 503 | 36% helix, 25% strand | Q5QYV9 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 667 | 0.75 | 0.81 | 71 | empty |
| 2 | 205 | 0.47 | 0.74 | 34 | empty |
| 3 | 94 | 0.37 | 0.75 | 14 | empty |
| 4 | 64 | 0.27 | 0.72 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5QYV9
- Elsewhere: UniProt Q5QYV9 · AlphaFold DB Q5QYV9
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