MolNFT v1 · #449325 · protein
AlphaFold monomer V2.0 prediction for lysine--tRNA ligase (Q5NY31)
Q5NY31: “AlphaFold monomer V2.0 prediction for lysine--tRNA ligase (Q5NY31)”. 5 pockets (best druggability 0.72). MolNFT v1 #449325 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5NY31
- Type
- protein
- Length
- 502 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd10960F956646DE8b64d3598984c91C2d5Af3D7b
- Molecule
- Lysine--tRNA ligase
- UniProt
- Q5NY31
- Pockets
- 5 · best druggability 0.72
Structure
1 distinct chain · 38% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lysine--tRNA ligase | protein | 502 | 38% helix, 25% strand | Q5NY31 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 698 | 0.72 | 0.79 | 73 | empty |
| 2 | 109 | 0.39 | 0.75 | 18 | empty |
| 3 | 62 | 0.32 | 0.75 | 15 | empty |
| 4 | 63 | 0.27 | 0.72 | 22 | empty |
| 5 | 65 | 0.27 | 0.72 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5NY31
- Elsewhere: UniProt Q5NY31 · AlphaFold DB Q5NY31
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