MolNFT v1 · #446061 · protein
AlphaFold monomer V2.0 prediction for glutamate--tRNA ligase (Q8D375)
Q8D375: “AlphaFold monomer V2.0 prediction for glutamate--tRNA ligase (Q8D375)”. 5 pockets (best druggability 0.67). MolNFT v1 #446061 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8D375
- Type
- protein
- Length
- 473 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9073C46348542FfE4327c3F363F9B51B22058e75
- Molecule
- Glutamate--tRNA ligase
- UniProt
- Q8D375
- Pockets
- 5 · best druggability 0.67
Structure
1 distinct chain · 53% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glutamate--tRNA ligase | protein | 473 | 53% helix, 12% strand | Q8D375 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 325 | 0.67 | 0.82 | 33 | empty |
| 2 | 291 | 0.50 | 0.73 | 42 | empty |
| 3 | 78 | 0.36 | 0.76 | 12 | empty |
| 4 | 60 | 0.34 | 0.77 | 15 | empty |
| 5 | 56 | 0.31 | 0.77 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8D375
- Elsewhere: UniProt Q8D375 · AlphaFold DB Q8D375
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