MolNFT v1 · #444332 · protein
AlphaFold monomer V2.0 prediction for cysteine--tRNA ligase (P53852)
P53852: “AlphaFold monomer V2.0 prediction for cysteine--tRNA ligase (P53852)”. 6 pockets (best druggability 0.76). MolNFT v1 #444332 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P53852
- Type
- protein
- Length
- 767 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBF0D2e107Ce1EcD2C4369B042274201DB719AaAF
- Molecule
- Cysteine--tRNA ligase
- UniProt
- P53852
- Pockets
- 6 · best druggability 0.76
Structure
1 distinct chain · 55% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cysteine--tRNA ligase | protein | 767 | 55% helix, 12% strand | P53852 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 915 | 0.76 | 0.79 | 73 | empty |
| 2 | 57 | 0.47 | 0.85 | 19 | empty |
| 3 | 61 | 0.41 | 0.81 | 20 | empty |
| 4 | 66 | 0.41 | 0.80 | 15 | empty |
| 5 | 50 | 0.40 | 0.82 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P53852
- Elsewhere: UniProt P53852 · AlphaFold DB P53852
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