MolNFT v1 · #444126 · protein
AlphaFold monomer V2.0 prediction for cysteine--tRNA ligase (Q8ZYD8)
Q8ZYD8: “AlphaFold monomer V2.0 prediction for cysteine--tRNA ligase (Q8ZYD8)”. 5 pockets (best druggability 0.67). MolNFT v1 #444126 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8ZYD8
- Type
- protein
- Length
- 474 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x40B9C9d5F084D34d026E9d5Dd10501AcdF6d6152
- Molecule
- Cysteine--tRNA ligase
- UniProt
- Q8ZYD8
- Pockets
- 5 · best druggability 0.67
Structure
1 distinct chain · 51% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cysteine--tRNA ligase | protein | 474 | 51% helix, 17% strand | Q8ZYD8 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 324 | 0.67 | 0.81 | 37 | empty |
| 2 | 106 | 0.47 | 0.80 | 17 | empty |
| 3 | 62 | 0.36 | 0.78 | 11 | empty |
| 4 | 66 | 0.31 | 0.75 | 18 | empty |
| 5 | 74 | 0.30 | 0.73 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8ZYD8
- Elsewhere: UniProt Q8ZYD8 · AlphaFold DB Q8ZYD8
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