MolNFT v1 · #443627 · protein
AlphaFold monomer V2.0 prediction for syncytin-2 (P61554)
P61554: “AlphaFold monomer V2.0 prediction for syncytin-2 (P61554)”. 8 pockets (best druggability 0.74). MolNFT v1 #443627 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P61554
- Type
- protein
- Length
- 538 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x8fB66D2ad2759AdE726c2A8B977129445f1a1D4C
- Molecule
- Syncytin-2
- UniProt
- P61554
- Pockets
- 8 · best druggability 0.74
Structure
1 distinct chain · 32% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Syncytin-2 | protein | 538 | 32% helix, 15% strand | P61554 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 827 | 0.74 | 0.78 | 77 | empty |
| 2 | 216 | 0.64 | 0.83 | 31 | empty |
| 3 | 401 | 0.57 | 0.74 | 36 | empty |
| 4 | 185 | 0.42 | 0.73 | 23 | empty |
| 5 | 71 | 0.42 | 0.80 | 16 | empty |
Modifications
Observed in the structure: 7 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P61554
- Elsewhere: UniProt P61554 · AlphaFold DB P61554
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