MolNFT v1 · #443525 · protein
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q5GYM8)
Q5GYM8: “AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q5GYM8)”. 7 pockets (best druggability 0.70). MolNFT v1 #443525 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5GYM8
- Type
- protein
- Length
- 882 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5881B09f2D8e743400698633641fc1cD2Ed2BE6F
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q5GYM8
- Pockets
- 7 · best druggability 0.70
Structure
1 distinct chain · 41% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 882 | 41% helix, 27% strand | Q5GYM8 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 519 | 0.70 | 0.80 | 53 | empty |
| 2 | 345 | 0.55 | 0.75 | 42 | empty |
| 3 | 235 | 0.55 | 0.77 | 33 | empty |
| 4 | 62 | 0.43 | 0.82 | 18 | empty |
| 5 | 56 | 0.41 | 0.81 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5GYM8
- Elsewhere: UniProt Q5GYM8 · AlphaFold DB Q5GYM8
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