MolNFT v1 · #443498 · protein
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (P61708)
P61708: “AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (P61708)”. 5 pockets (best druggability 0.82). MolNFT v1 #443498 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P61708
- Type
- protein
- Length
- 600 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbb2F1C7CB3A1eeFAc24fCa72cc627162D5413FD7
- Molecule
- Alanine--tRNA ligase
- UniProt
- P61708
- Pockets
- 5 · best druggability 0.82
Structure
1 distinct chain · 42% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 600 | 42% helix, 22% strand | P61708 |
Pockets
5 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 270 | 0.82 | 0.93 | 57 | empty |
| 2 | 694 | 0.73 | 0.80 | 79 | empty |
| 3 | 425 | 0.66 | 0.79 | 64 | empty |
| 4 | 86 | 0.57 | 0.87 | 20 | empty |
| 5 | 67 | 0.29 | 0.73 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P61708
- Elsewhere: UniProt P61708 · AlphaFold DB P61708
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