MolNFT v1 · #443435 · protein
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q04JW5)
Q04JW5: “AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q04JW5)”. 6 pockets (best druggability 0.69). MolNFT v1 #443435 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q04JW5
- Type
- protein
- Length
- 872 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9F605311B7e26e76340423EfAfbE5e2EFc7A0b7C
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q04JW5
- Pockets
- 6 · best druggability 0.69
Structure
1 distinct chain · 42% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 872 | 42% helix, 25% strand | Q04JW5 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 522 | 0.69 | 0.79 | 56 | empty |
| 2 | 300 | 0.54 | 0.75 | 37 | empty |
| 3 | 218 | 0.54 | 0.77 | 37 | empty |
| 4 | 196 | 0.46 | 0.74 | 27 | empty |
| 5 | 51 | 0.34 | 0.79 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q04JW5
- Elsewhere: UniProt Q04JW5 · AlphaFold DB Q04JW5
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